celltrace blue cell proliferation kit c34568 (Thermo Fisher)
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Celltrace Blue Cell Proliferation Kit C34568, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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other:Article Title: Isolation and Analysis of Tumor-derived Exosomes Article Snippet: The blood samples were delivered to the laboratory and processed as described below. . Equipment FalconTM 50 mL Conical Centrifuge Tubes (Fisher Scientific, cat. # 14-432-22). Enzyme-linked Immunosorbent Assay:Article Title: Immunomodulatory effects and improved outcomes with cisplatin- versus carboplatin-based chemotherapy plus atezolizumab in urothelial cancer Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Mouse CXCL10 ELISA kit Thermo Fisher Scientific Cat# BMS6018 Mouse HMGB1 ELISA kit Tecan Cat# 30164033 CellTrace Blue Cell Proliferation kit Thermo Fisher Scientific Cat# C34568 RNeasy kits Qiagen FITC Annexin V Apoptosis Detection Kit with 7-AAD BD Biosciences Cat#: 556547 RIPA buffer Sigma LIVE/DEAD Fixable Aqua Dead Cell Stain Kit Invitrogen L34957 Deposited data Raw and analyzed bulk RNAseq (cell lines) This paper GEO: GSE235066 PBMC scRNA-seq raw counts and metadata This paper EGAS50000000104 IMvigor130 bulk RNAseq processed data (patient tumors) This paper EGAS50000000104 Experimental models: Cell lines Human cell line: 5637 Genentech N/A Human cell line: RT112 Genentech N/A Mouse cell line: MC38 Genentech N/A Mouse cell line: MC38-OVA Genentech N/A Experimental models: Organisms/strains C57BL/6 C57BL/6J.OT-I.Thy1.1 Software and algorithms R statistical software, version 4.0.2 The R Foundation https://www.r-project.org/ GSNAP Wu et al., 201649; Wu et al., 201050 survminer package, version 0.4.8 CRAN Repository https://cran.r-project.org/web/packages/ survminer/index.html survival package, version 3.2–7 CRAN Repository https://cran.r-project.org/web/packages/ survival/index.html limma package, 3.44.3 Bioconductor https://bioconductor.org/packages/ release/bioc/html/limma.html fgsea package, 1.14.0 Bioconductor http://bioconductor.org/packages/fgsea CellRanger, 3.1.0 10X Genomics http://10xgenomics.com/ Seurat, v3.2.2 Stuart et al., 201951 https://satijalab.org/seurat Harmony, v1.0 Korsunsky et al., 201952 https://github.com/immunogenomics/harmony FlowJo Becton Dickinson https://flowjo.com/ Graphpad Prism 7.0 software GraphPad Software, Inc. http://www.graphpad.com/scientific software/prism/ GSVA Bioconductor https://bioconductor.org/packages/ release/bioc/html/GSVA.html Article ll OPEN ACCESS .. REAGENT or RESOURCE SOURCE IDENTIFIER Mouse CXCL10 ELISA kit Thermo Fisher Scientific Cat# BMS6018 Mouse HMGB1 ELISA kit Tecan Cat# 30164033 Staining:Article Title: Immunomodulatory effects and improved outcomes with cisplatin- versus carboplatin-based chemotherapy plus atezolizumab in urothelial cancer Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Mouse CXCL10 ELISA kit Thermo Fisher Scientific Cat# BMS6018 Mouse HMGB1 ELISA kit Tecan Cat# 30164033 CellTrace Blue Cell Proliferation kit Thermo Fisher Scientific Cat# C34568 RNeasy kits Qiagen FITC Annexin V Apoptosis Detection Kit with 7-AAD BD Biosciences Cat#: 556547 RIPA buffer Sigma LIVE/DEAD Fixable Aqua Dead Cell Stain Kit Invitrogen L34957 Deposited data Raw and analyzed bulk RNAseq (cell lines) This paper GEO: GSE235066 PBMC scRNA-seq raw counts and metadata This paper EGAS50000000104 IMvigor130 bulk RNAseq processed data (patient tumors) This paper EGAS50000000104 Experimental models: Cell lines Human cell line: 5637 Genentech N/A Human cell line: RT112 Genentech N/A Mouse cell line: MC38 Genentech N/A Mouse cell line: MC38-OVA Genentech N/A Experimental models: Organisms/strains C57BL/6 C57BL/6J.OT-I.Thy1.1 Software and algorithms R statistical software, version 4.0.2 The R Foundation https://www.r-project.org/ GSNAP Wu et al., 201649; Wu et al., 201050 survminer package, version 0.4.8 CRAN Repository https://cran.r-project.org/web/packages/ survminer/index.html survival package, version 3.2–7 CRAN Repository https://cran.r-project.org/web/packages/ survival/index.html limma package, 3.44.3 Bioconductor https://bioconductor.org/packages/ release/bioc/html/limma.html fgsea package, 1.14.0 Bioconductor http://bioconductor.org/packages/fgsea CellRanger, 3.1.0 10X Genomics http://10xgenomics.com/ Seurat, v3.2.2 Stuart et al., 201951 https://satijalab.org/seurat Harmony, v1.0 Korsunsky et al., 201952 https://github.com/immunogenomics/harmony FlowJo Becton Dickinson https://flowjo.com/ Graphpad Prism 7.0 software GraphPad Software, Inc. http://www.graphpad.com/scientific software/prism/ GSVA Bioconductor https://bioconductor.org/packages/ release/bioc/html/GSVA.html Article ll OPEN ACCESS .. REAGENT or RESOURCE SOURCE IDENTIFIER Mouse CXCL10 ELISA kit Thermo Fisher Scientific Cat# BMS6018 Mouse HMGB1 ELISA kit Tecan Cat# 30164033 Software:Article Title: Immunomodulatory effects and improved outcomes with cisplatin- versus carboplatin-based chemotherapy plus atezolizumab in urothelial cancer Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Mouse CXCL10 ELISA kit Thermo Fisher Scientific Cat# BMS6018 Mouse HMGB1 ELISA kit Tecan Cat# 30164033 CellTrace Blue Cell Proliferation kit Thermo Fisher Scientific Cat# C34568 RNeasy kits Qiagen FITC Annexin V Apoptosis Detection Kit with 7-AAD BD Biosciences Cat#: 556547 RIPA buffer Sigma LIVE/DEAD Fixable Aqua Dead Cell Stain Kit Invitrogen L34957 Deposited data Raw and analyzed bulk RNAseq (cell lines) This paper GEO: GSE235066 PBMC scRNA-seq raw counts and metadata This paper EGAS50000000104 IMvigor130 bulk RNAseq processed data (patient tumors) This paper EGAS50000000104 Experimental models: Cell lines Human cell line: 5637 Genentech N/A Human cell line: RT112 Genentech N/A Mouse cell line: MC38 Genentech N/A Mouse cell line: MC38-OVA Genentech N/A Experimental models: Organisms/strains C57BL/6 C57BL/6J.OT-I.Thy1.1 Software and algorithms R statistical software, version 4.0.2 The R Foundation https://www.r-project.org/ GSNAP Wu et al., 201649; Wu et al., 201050 survminer package, version 0.4.8 CRAN Repository https://cran.r-project.org/web/packages/ survminer/index.html survival package, version 3.2–7 CRAN Repository https://cran.r-project.org/web/packages/ survival/index.html limma package, 3.44.3 Bioconductor https://bioconductor.org/packages/ release/bioc/html/limma.html fgsea package, 1.14.0 Bioconductor http://bioconductor.org/packages/fgsea CellRanger, 3.1.0 10X Genomics http://10xgenomics.com/ Seurat, v3.2.2 Stuart et al., 201951 https://satijalab.org/seurat Harmony, v1.0 Korsunsky et al., 201952 https://github.com/immunogenomics/harmony FlowJo Becton Dickinson https://flowjo.com/ Graphpad Prism 7.0 software GraphPad Software, Inc. http://www.graphpad.com/scientific software/prism/ GSVA Bioconductor https://bioconductor.org/packages/ release/bioc/html/GSVA.html Article ll OPEN ACCESS .. REAGENT or RESOURCE SOURCE IDENTIFIER Mouse CXCL10 ELISA kit Thermo Fisher Scientific Cat# BMS6018 Mouse HMGB1 ELISA kit Tecan Cat# 30164033 Cell Isolation:Article Title: Isolation and Analysis of Tumor-derived Exosomes Article Snippet: .. Materials List Whole blood of normal donors Falcon™ 50 mL Conical Centrifuge Tubes (Fisher Scientific, cat. # 14-432-22) Ficoll® Paque Plus (Millipore Sigma, cat. # 17-1440-03) Lonza™ BioWhittaker™ Phosphate Buffered Solution (PBS) (Lonza Inc., cat. # BW17-516F) RPMI-1640 Medium (Sigma-Aldrich, St. Louis, MO, USA, cat. # R0883) Corning™ Regular Fetal Bovine Serum (FBS; Fisher Scientific, Pittsburgh, PA, cat. # MT35011CV) Penicillin Streptomycin Solution (Corning, Corning, NY, USA, cat. # 30-002-CI) L-Glutamine (Fisher Scientific, cat. # 25030081) 150 cm 2 BD Falcon™ Tissue Culture Treated Flasks (Fisher Scientific, cat. # 08-772-48) CD4 + T Cell Isolation Kit, human (Miltenyi Biotec, San Diego, CA, cat. # 130-096-533) CD8 + T Cell Isolation Kit, human (Miltenyi Biotec, cat. # 130-096-495) AutoMACS cell separator (Miltenyi Biotec) Flow Cytometry:Article Title: Isolation and Analysis of Tumor-derived Exosomes Article Snippet: .. Materials List Whole blood of normal donors Falcon™ 50 mL Conical Centrifuge Tubes (Fisher Scientific, cat. # 14-432-22) Ficoll® Paque Plus (Millipore Sigma, cat. # 17-1440-03) Lonza™ BioWhittaker™ Phosphate Buffered Solution (PBS) (Lonza Inc., cat. # BW17-516F) RPMI-1640 Medium (Sigma-Aldrich, St. Louis, MO, USA, cat. # R0883) Corning™ Regular Fetal Bovine Serum (FBS; Fisher Scientific, Pittsburgh, PA, cat. # MT35011CV) Penicillin Streptomycin Solution (Corning, Corning, NY, USA, cat. # 30-002-CI) L-Glutamine (Fisher Scientific, cat. # 25030081) 150 cm 2 BD Falcon™ Tissue Culture Treated Flasks (Fisher Scientific, cat. # 08-772-48) CD4 + T Cell Isolation Kit, human (Miltenyi Biotec, San Diego, CA, cat. # 130-096-533) CD8 + T Cell Isolation Kit, human (Miltenyi Biotec, cat. # 130-096-495) AutoMACS cell separator (Miltenyi Biotec) Isolation:Article Title: Isolation and Analysis of Tumor-derived Exosomes Article Snippet: .. Materials List Whole blood of normal donors Falcon™ 50 mL Conical Centrifuge Tubes (Fisher Scientific, cat. # 14-432-22) Ficoll® Paque Plus (Millipore Sigma, cat. # 17-1440-03) Lonza™ BioWhittaker™ Phosphate Buffered Solution (PBS) (Lonza Inc., cat. # BW17-516F) RPMI-1640 Medium (Sigma-Aldrich, St. Louis, MO, USA, cat. # R0883) Corning™ Regular Fetal Bovine Serum (FBS; Fisher Scientific, Pittsburgh, PA, cat. # MT35011CV) Penicillin Streptomycin Solution (Corning, Corning, NY, USA, cat. # 30-002-CI) L-Glutamine (Fisher Scientific, cat. # 25030081) 150 cm 2 BD Falcon™ Tissue Culture Treated Flasks (Fisher Scientific, cat. # 08-772-48) CD4 + T Cell Isolation Kit, human (Miltenyi Biotec, San Diego, CA, cat. # 130-096-533) CD8 + T Cell Isolation Kit, human (Miltenyi Biotec, cat. # 130-096-495) AutoMACS cell separator (Miltenyi Biotec) Sterility:Article Title: Isolation and Analysis of Tumor-derived Exosomes Article Snippet: .. Materials List Whole blood of normal donors Falcon™ 50 mL Conical Centrifuge Tubes (Fisher Scientific, cat. # 14-432-22) Ficoll® Paque Plus (Millipore Sigma, cat. # 17-1440-03) Lonza™ BioWhittaker™ Phosphate Buffered Solution (PBS) (Lonza Inc., cat. # BW17-516F) RPMI-1640 Medium (Sigma-Aldrich, St. Louis, MO, USA, cat. # R0883) Corning™ Regular Fetal Bovine Serum (FBS; Fisher Scientific, Pittsburgh, PA, cat. # MT35011CV) Penicillin Streptomycin Solution (Corning, Corning, NY, USA, cat. # 30-002-CI) L-Glutamine (Fisher Scientific, cat. # 25030081) 150 cm 2 BD Falcon™ Tissue Culture Treated Flasks (Fisher Scientific, cat. # 08-772-48) CD4 + T Cell Isolation Kit, human (Miltenyi Biotec, San Diego, CA, cat. # 130-096-533) CD8 + T Cell Isolation Kit, human (Miltenyi Biotec, cat. # 130-096-495) AutoMACS cell separator (Miltenyi Biotec) Transferring:Article Title: Isolation and Analysis of Tumor-derived Exosomes Article Snippet: .. Materials List Whole blood of normal donors Falcon™ 50 mL Conical Centrifuge Tubes (Fisher Scientific, cat. # 14-432-22) Ficoll® Paque Plus (Millipore Sigma, cat. # 17-1440-03) Lonza™ BioWhittaker™ Phosphate Buffered Solution (PBS) (Lonza Inc., cat. # BW17-516F) RPMI-1640 Medium (Sigma-Aldrich, St. Louis, MO, USA, cat. # R0883) Corning™ Regular Fetal Bovine Serum (FBS; Fisher Scientific, Pittsburgh, PA, cat. # MT35011CV) Penicillin Streptomycin Solution (Corning, Corning, NY, USA, cat. # 30-002-CI) L-Glutamine (Fisher Scientific, cat. # 25030081) 150 cm 2 BD Falcon™ Tissue Culture Treated Flasks (Fisher Scientific, cat. # 08-772-48) CD4 + T Cell Isolation Kit, human (Miltenyi Biotec, San Diego, CA, cat. # 130-096-533) CD8 + T Cell Isolation Kit, human (Miltenyi Biotec, cat. # 130-096-495) AutoMACS cell separator (Miltenyi Biotec) Incubation:Article Title: Antigen-Specific T Cell Recall Assay To Screen Drugs For Off-Target Effects Article Snippet: .. Donor PBMCs were incubated with 5μM Labeling:Article Title: Immunomodulatory effects and improved outcomes with cisplatin- versus carboplatin-based chemotherapy plus atezolizumab in urothelial cancer Article Snippet: .. The following day, OT-I CD8 + T cells labeled with the |
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